tmhmm v2.0 online tool Search Results


tmhmm server (v.2.0)  (HealthTech Connex Inc)
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Tmhmm Server (V.2.0), supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm v.2.0  (HealthTech Connex Inc)
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Tmhmm V.2.0, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm  (Proscan GmbH)
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Tmhmm, supplied by Proscan GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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transmembrane hidden markov model tmhmm v2.0  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Transmembrane Hidden Markov Model Tmhmm V2.0, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm v 2.0 webserver  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Tmhmm V 2.0 Webserver, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmmserver v2.0  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Tmhmmserver V2.0, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm v2.0 server  (InterPro Inc)
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InterPro Inc tmhmm v2.0 server
A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Tmhmm V2.0 Server, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm v. 2.0  (CS Bio Inc)
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CS Bio Inc tmhmm v. 2.0
A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Tmhmm V. 2.0, supplied by CS Bio Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tmhmm v. 2.0 - by Bioz Stars, 2026-10
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tmhmm server v. 2.0  (CS Bio Inc)
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CS Bio Inc tmhmm server v. 2.0
A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Tmhmm Server V. 2.0, supplied by CS Bio Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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hmmer tool  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Hmmer Tool, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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lipop-1.0  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
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thmhh server v. 2.0  (HealthTech Connex Inc)
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A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line <t>transmembrane</t> hidden <t>Markov</t> model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.
Thmhh Server V. 2.0, supplied by HealthTech Connex Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line transmembrane hidden Markov model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.

Journal: Nature Communications

Article Title: Cul3-KLHL20 E3 ubiquitin ligase plays a key role in the arms race between HIV-1 Nef and host SERINC5 restriction

doi: 10.1038/s41467-022-30026-y

Figure Lengend Snippet: A A Ser5 membrane topology model is presented. Five ECLs, 10 TMDs, and 4 ICLs are indicated. Nineteen lysine residues (K1 to K19) are numbered and colored in red. Their distributions into these regions are indicated. Their positions in Ser5 protein are also indicated. The Ser5 membrane topology was predicted by the on-line transmembrane hidden Markov model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ). ECL, extracellular loop; TMD, transmembrane domain; ICL, intracellular loop. B Ser5 and its lysine mutants were expressed with Ub in HEK293T cells. Ser5 was immunoprecipitated by anti-FLAG and levels of polyubiquitinated Ser5 were compared by WB. C The Ser5-130K mutant (130 K) was expressed with Ub and its mutants bearing indicated K-to-R mutations in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. D The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. E The 130 K mutant was expressed with indicated Ub mutants in HEK293T cells in the presence or absence of KLHL20 -KD. Ectopic Ub was immunoprecipitated by anti-HA and levels of polyubiquitinated Ser5 were compared by WB. All experiments were repeated at least twice, and similar results were obtained. Source data are provided as a Source Data file.

Article Snippet: The Ser5 membrane topology was predicted by the on-line transmembrane hidden Markov model (TMHMM, v2.0) ( https://services.healthtech.dtu.dk/service.php?TMHMM-2.0 ) and the model was generated by Protter ( http://wlab.ethz.ch/protter/start/ ).

Techniques: Membrane, Generated, Immunoprecipitation, Mutagenesis